Partek Flow: Hands-On DNA-Seq and ChIP-Seq Data Analysis

  • Registration Closed
  • May 15, 2018
  • 01:30 PM to 04:30 PM
  • NIH Library Training Room

Bioinformatics is an interdisciplinary field that develops methods and software tools for understanding biological data. As an interdisciplinary field of science, bioinformatics combines computer science, statistics, mathematics, and engineering to analyze and interpret biological data.

The NIH Library provides access to many analysis tools and databases on the bioinformatics workstations. Reservations are required to use the workstations.

Session Description

Abstract: Students will learn how to use the point-and-click interface in Partek Flow to go from raw data to experimental results for DNA-Seq and ChIP-Seq data analysis:

- Import data from bam

- Filter duplicates

- SNV detection

- Variant filter and annotation

- Peak detection and annotation

-Visualization

  • Chromosome view
  • Sankey plot
  • TSS plot

Benefits: Acquire working knowledge of tools available to NIH researchers for the start to finish DNA-Seq and ChIP-seq data analysis

Description: Hands-on DNA-Seq Data and CHIP-seq data analysis training on Partek Flow.

Who should attend: NIH staff interested in learning DNA-Seq data analysis and ChIP-seq data analysis.         

Time Required: 3 hours

 

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